BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031B12LP1|AL429350
(998 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig977 1546 0.0
3x_Contig498 259 1e-68
>3x_Contig977
Length = 3887
Score = 1546 bits (771), Expect = 0.0
Identities = 810/831 (97%), Gaps = 2/831 (0%)
Strand = Plus / Minus
Query: 169 tatatwcctgtaacagtacgtatatttttctgatttttacatcaccatcttaaactcatc 228
||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 3693 tatatacctgtaacagtacgtttatttttctgatttttacatcaccatcttaaactcatc 3634
Query: 229 aaatttggaaacaggtagcagatcaatcatagacgtgaccatttgcmatatacaaaataa 288
|||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||
Sbjct: 3633 aaatttggaaacaggtagcagatcaatc-tagacgtgaccgtttgcaatatacaaaataa 3575
Query: 289 tcaatattgtttaaattacatatramatcgtttcaggaaccaaacacttcgacttacaaa 348
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 3574 tcaatattgtttaaattacatatgaaatcgtttcaggaaccaaacacttcgacttacaaa 3515
Query: 349 aatgccaaasamaghyhtcaagactgaattcattcttttttgctgattatcgaagctaaa 408
||||||||| | || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3514 aatgccaaagaaagatatcaagactgaattcattcttttttgctgattatcgaagctaaa 3455
Query: 409 tcgttataggtttcctctttcttaatgtaagcccctccagaagttgaattttgtttagtt 468
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 3454 tcgttataggtttcctctttcttaatgtaagcacctccagaagttgaattttgtttagtt 3395
Query: 469 gtattagtctggatagattcttgagattgactatgtkagtwttgtcttagtagcttttcc 528
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 3394 gtattagtctggatagattcttgagattgactatgtgagttttgtcttagtagcttttcc 3335
Query: 529 ttcatcttcaattcaatagcctttctttcaagttcttgaattctcttttgtaactctttg 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3334 ttcatcttcaattcaatagcctttctttcaagttcttgaattctcttttgtaactctttg 3275
Query: 589 gcagattgtgcctccmattcttcaagcttttgtttccttgctactatgcgctcgtgctra 648
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 3274 gcagattgtgcctccaattcttcaagcttttgtttccttgctactatgcgctcgtgctga 3215
Query: 649 agcatgtatgggatattttcggaaatattccgtaactttgttctttctggagaagtttga 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3214 agcatgtatgggatattttcggaaatattccgtaactttgttctttctggagaagtttga 3155
Query: 709 atattggcaggagtagatttctgtgaactggcagagattgaagcgcgagactcatctcct 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3154 atattggcaggagtagatttctgtgaactggcagagattgaagcgcgagactcatctcct 3095
Query: 769 tcatctaccccggttagacgtggtgtagatggggtttcagattgaggtggaattgcaagt 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3094 tcatctaccccggttagacgtggtgtagatggggtttcagattgaggtggaattgcaagt 3035
Query: 829 kattkttgagacttaaactttcctgtatttattagagaggcgaaatttgacaaggatgga 888
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3034 gattgttgagacttaaactttcctgtatttattagagaggcgaaatttgacaaggatgga 2975
Query: 889 gctgtactgtttctagtcaaccctttcatcaaccctgaagaattaccctcattgttttcg 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2974 gctgtactgtttctagtcaaccctttcatcaaccctgaagaattaccctcattgttttcg 2915
Query: 949 tcattkatagaagtatctataacttcgttgttttcaatgt-ccaggctggc 998
||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2914 tcattgatagaagtatctataacttcgttgttttcaatgtcccaggctggc 2864
>3x_Contig498
Length = 2351
Score = 259 bits (129), Expect = 1e-68
Identities = 148/155 (95%)
Strand = Plus / Minus
Query: 1 tarttctctccagttacactagctattttttatcttgaagcactggatgaacataaattt 60
|| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 686 tagttctctccagttacactagctatttcccatcttgaagcactggatgaacataaattc 627
Query: 61 ttcaccaatcttttttatctcataatactatgtcatctgaacagataaattccatttatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 cccaccaatcttttttatctcataatactatgtcatctgaacagataaattccatttatt 567
Query: 121 gataagtggcacgaaaataccttaactcattatta 155
|||||||||||||||||||||||||||||||||||
Sbjct: 566 gataagtggcacgaaaataccttaactcattatta 532
Score = 221 bits (110), Expect = 3e-57
Identities = 312/386 (80%)
Strand = Plus / Minus
Query: 292 atattgtttaaattacatatramatcgtttcaggaaccaaacacttcgacttacaaaaat 351
|||||||||| ||| |||| | || |||| |||||| ||| | || || ||| ||||||
Sbjct: 396 atattgtttatgttatatatgagatggtttgaggaacgaaaaaattagaattagaaaaat 337
Query: 352 gccaaasamaghyhtcaagactgaattcattcttttttgctgattatcgaagctaaatcg 411
|| ||| | || | |||| |||||| ||| ||||||||||||||| |||| ||||| |
Sbjct: 336 gctaaagaaagatattaagagtgaattgattattttttgctgattatggaagataaatgg 277
Query: 412 ttataggtttcctctttcttaatgtaagcccctccagaagttgaattttgtttagttgta 471
|||||||||| | ||| ||||||||||| | || |||||||||||||||||||||||||
Sbjct: 276 ttataggttttttatttgttaatgtaagcacgtctagaagttgaattttgtttagttgta 217
Query: 472 ttagtctggatagattcttgagattgactatgtkagtwttgtcttagtagcttttccttc 531
||||| |||||||||| |||||||||| ||||| ||| |||| |||||||||||| ||
Sbjct: 216 ttagtgtggatagattgttgagattgaatatgtgagttttgtgttagtagctttttatta 157
Query: 532 atcttcaattcaatagcctttctttcaagttcttgaattctcttttgtaactctttggca 591
|| || |||| ||||| ||| ||| ||||| ||||||| | | |||| | | ||||| |
Sbjct: 156 atattgaattgaatagaatttattttaagttgttgaattatatattgtgagtgtttggga 97
Query: 592 gattgtgcctccmattcttcaagcttttgtttccttgctactatgcgctcgtgctraagc 651
|||||||||| ||| || ||| |||||||| ||| || |||| | ||||||| |||
Sbjct: 96 gattgtgccttaaattatttaaggttttgttttattgataatatgggatcgtgctgaaga 37
Query: 652 atgtatgggatattttcggaaatatt 677
||||||||| |||||| || ||||||
Sbjct: 36 atgtatggggtattttggggaatatt 11
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,363
Number of Sequences: 1807
Number of extensions: 12363
Number of successful extensions: 1073
Number of sequences better than 1.0e-20: 2
length of query: 998
length of database: 10,358,551
effective HSP length: 16
effective length of query: 982
effective length of database: 10,329,639
effective search space: 10143705498
effective search space used: 10143705498
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)